chore(core): remove retired site_domain helper and update docs

documentation/PROJECT__Use_AE_API_V3_CRUD_upgrade.md

@@ -35,8 +35,8 @@ Legacy patterns persisting in core logic and config modules.
 
 - [ ] `src/lib/ae_sponsorships/ae_sponsorships_functions.ts`
 - [x] `src/lib/ae_core/core__hosted_files.ts` (Migrated 2026-01-20)
-- [x] `src/lib/ae_core/core__site.ts` (Migrated 2026-01-26)
-- [ ] `src/lib/ae_core/core__site_domain.ts` (STILL USES `get_ae_obj_id_crud` for bootstrap)
+- [x] `src/lib/ae_core/core__site.ts` (Migrated 2026-01-26; bootstrap path uses V3 `search_ae_obj` by `fqdn`)
+- [x] `src/lib/ae_core/core__site_domain.ts` (Retired 2026-06-02; helper removed after bootstrap migration to `core__site.ts`)
 - [ ] `src/lib/ae_core/ae_core_functions.ts` (STILL USES `get_ae_obj_id_crud` / `update_ae_obj_id_crud`)
 - [ ] `src/lib/ae_core/core__country_subdivisions.ts`
 - [ ] `src/lib/ae_core/core__time_zones.ts`

documentation/TODO__Agents.md

@@ -13,12 +13,11 @@
   Actions, edit mode only). Kills PowerPoint, Keynote, Adobe Acrobat Reader DC, VLC, soffice.
   List overridable via `event_device.other_json.launcher.kill_process_li`. Auto-cleanup on file
   open (deferred — manual button sufficient for CMSC).
-- [ ] **[Launcher] Hidden/deleted files still visible in Presenter file list** — When an
-  `event_file` is hidden (`hide=1`) or soft-deleted, it continues to appear in the Launcher's
-  per-presenter file list. Needs investigation: likely the Launcher's IDB query or the
-  file-list component does not apply a `!hide` / `enable` filter. Check the file list query
-  in the Launcher file components and the `properties_to_save` whitelist in
-  `ae_events__event_file.ts` to confirm `hide` and `enable` are persisted to IDB.
+- [x] **[Launcher] Hidden/deleted files still visible in Presenter file list** — Fixed by
+  API-to-Dexie stale-record pruning plus Launcher background refresh loops for file lists.
+  `ae_events__event_file.ts` now prunes stale records after refresh, and
+  `launcher_background_sync.svelte` refreshes/prunes selected session and presenter file lists.
+  (`fix(launcher): refresh file lists periodically to prune deleted/hidden files`, 2026-05)
 - [ ] **[Launcher/Electron] Wallpaper stops applying after several changes (post-CMSC)** —
   Append timestamp/random suffix to temp filename so macOS always sees a new path.
 - [ ] **[Launcher/Electron] Wallpaper drift after display hotplug (post-CMSC)** —
@@ -38,9 +37,10 @@
 Finalizing the 100% adoption of V3 Standard endpoints and retirement of legacy wrappers.
 
 - [x] **[Badges] Presenter Agreement Form** — migrated to `update_ae_obj` (2026-05-21)
-- [ ] **[Core] Site Domain Bootstrap Refactor** — `load_ae_obj_by_fqdn__site_domain` in
-  `core__site_domain.ts` still uses legacy ID-lookup-by-FQDN. Refactor to use V3
-  `api.search_ae_obj` with fqdn filter per integration guide.
+- [x] **[Core] Site Domain Bootstrap Refactor** — Bootstrap path is already on V3 in
+  `ae_core__site.ts` via `lookup_site_domain()` using `api.search_ae_obj` with FQDN filter
+  (used by `src/routes/+layout.ts`).
+  Follow-up cleanup complete: retired legacy helper `core__site_domain.ts`. (2026-06-02)
 - [ ] **[Core] Legacy Utility Helpers** — Refactor `ae_core_functions.ts` to use V3 helpers.
 - [ ] **[Cleanup] Delete Legacy Wrappers** — Once all callsites are migrated, remove
   `src/lib/ae_api/api_get__crud_obj_id.ts` and the legacy exports from `api.ts`.
@@ -86,6 +86,8 @@ Documented in `GUIDE__SvelteKit2_Svelte5_DexieJS.md` (IDB Sort section).
 ### [Journals] Journal Entry Config follow-ups
 - [ ] **[Journals] Entry passcode secondary auth** — implement `passcode_hash` comparison.
 - [ ] **[Journals] Summary AI shortcut** — add button to modal.
+  Note: AI tools are already available in entry edit view (`AE_Comp_Journal_Entry_AiTools`),
+  but no dedicated shortcut button exists yet inside `ae_comp__modal_journal_entry_config.svelte`.
 
 ### [Cleanup] Migrate remaining `lucide-svelte` imports to `@lucide/svelte`
 - [x] **[Cleanup] Migrate remaining `lucide-svelte` imports to `@lucide/svelte`**