- Add cortex/tools/scratch.py with scratch_read/write/append/clear tools
- Register all four scratch tools in the orchestrator tool registry
- Create inara/SCRATCH.md as the backing file (never distilled/archived)
- Fix auth.py: expiresAt reflects short-lived access token (~8h) not the
1-year refresh token — suppress expiry warning when refreshToken is present
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
- Add Agent mode toggle to web UI input row — routes through POST /orchestrate
instead of /chat; polls for result with live tool-call count in thinking bubble
- Add cortex/tools/system.py with claude_allow_dir tool; registers in tool registry
- Fix web search: duckduckgo_search renamed to ddgs, update import + requirements.txt
- Allow WebSearch and WebFetch in ~/.claude/settings.json for Claude CLI fallback
- Add claude-allow-dir script docs and security note to CLAUDE.md
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>